PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008243130.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 243aa    MW: 27675.3 Da    PI: 6.1555
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008243130.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH42.21.4e-1371122155
                     CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     ++ +hn+ Er RR++iNs ++  r+llP +   ++kKls   +  ++ +YI +Lq
  XP_008243130.1  71 KKLNHNASERDRRKKINSLYSSMRSLLPAD---QAKKLSIPNTISRVLKYIPELQ 122
                     6789**************************...*******************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.31370121IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.6E-1171138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.1E-1071122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.60E-871126No hitNo description
SuperFamilySSF474595.76E-1471138IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-676127IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010106Biological Processcellular response to iron ion starvation
GO:0055072Biological Processiron ion homeostasis
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    Send to blast
MLALSPPLFS TVGWPSEDPI GYDQKYFYRD SSNDQTAESF LHILPSQLPQ FELDLSTTIS  60
GDNSSGFAVA KKLNHNASER DRRKKINSLY SSMRSLLPAD QAKKLSIPNT ISRVLKYIPE  120
LQKQVEGLIR KREELLSRAS KQEDVMQEEK DMKSTARSSS LSAVSTYRLS DREVAIQIST  180
LKTHNNLLSE ILLNLEEEGL QVLNASFLES SGERVFYNLH LQVERSYRLE CENLSEKLMS  240
FYA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008243130.11e-178PREDICTED: transcription factor ORG2-like
SwissprotQ9M1K14e-64ORG2_ARATH; Transcription factor ORG2
TrEMBLM5VYD81e-169M5VYD8_PRUPE; Uncharacterized protein
STRINGVIT_08s0007g05300.t015e-95(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24023379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56970.11e-51bHLH family protein